SubtiBank SubtiBank
ynzB [2018-03-02 17:26:41]
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ynzB [2018-03-02 17:26:41]

potential D protein for the YndD-YndE-YndF germinant receptor of unknown specificity
locus
BSU17740
pI
9.57
mw
6.83 kDa
protein length
62 aa Sequence Blast
gene length
186 bp Sequence Blast
function
germination
product
potential D protein for the YndD-YndE-YndF germinant receptor
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.5|Germination/ based on similarity]

    • Gene

    Coordinates
    1,907,013 → 1,907,201

    Expression and Regulation

    Operons

    genes
    [gene|62BC8CCBAF1A6B165DAB28FA9701F522EBA8881D|yndA]-[gene|5847A7629C78CF770525CF79120CDD55D9622793|ynzB]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|14523133], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]

    • regulation

  • expressed during sporulation in the mother cell ([protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]) [Pubmed|14523133]
    • view in new tab

    Biological materials

    Mutant

  • BKE17740 (Δ[gene|5847A7629C78CF770525CF79120CDD55D9622793|ynzB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE17740 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAAACCTCCTGTTTT, downstream forward: _UP4_TAGTTTTCCCAGACTGCTAA
  • BKK17740 (Δ[gene|5847A7629C78CF770525CF79120CDD55D9622793|ynzB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK17740 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAAACCTCCTGTTTT, downstream forward: _UP4_TAGTTTTCCCAGACTGCTAA

    • References

  • 23625846